BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034F01SP1|AL429924
(845 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig642 1505 0.0
>3x_Contig642
Length = 2568
Score = 1505 bits (742), Expect = 0.0
Identities = 774/804 (96%)
Strand = Plus / Minus
Query: 4 cgagaactgaatcggcggagattctgtmtttcaatacaaccagggattgttgcwacagtg 63
||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 830 cgagaactgaatcggcggagattctgtctttcaatacaaccagggattgttgctacagtg 771
Query: 64 tgtgatgatattggatttagtgctaaarawtgcmgggaggatawaagagtcgacaaacga 123
||||||||||||||||||||||||||| | ||| ||||||||| ||||||||||||||||
Sbjct: 770 tgtgatgatattggatttagtgctaaagattgccgggaggatataagagtcgacaaacga 711
Query: 124 agcatagttgcaggagawaaawcttgtaaatmagaatcatccaatatagtcatcggagtw 183
||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 710 agcatagttgcaggagataaatcttgtaaatcagaatcatccaatatagtcatcggagtt 651
Query: 184 acttccgawaatgcggagtctgtagcaatcaatgaaggawcttcgacgagttctggacca 243
|||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 650 acttccgataatgcggagtctgtagcaatcaatgaaggatcttcgacgagttctggacca 591
Query: 244 tgggtgaaccatctctgagacatgttgaagawaacgcttggtaatacgtccttaaawatc 303
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 590 tgggtgaaccatctctgagacatgttgaagataacgcttggtaatacgtccttaaatatc 531
Query: 304 gtttccatagaattcttgagtctcttctcgawactcgtttgtaacaatttcatggaacat 363
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 530 gtttccatagaattcttgagtctcttctcgatactcgtttgtaacaatttcatggaacat 471
Query: 364 tcaaawctgaaawcwaaatwgacatcattaaaarawatcccaactccagtattcttcaca 423
||||| |||||| | |||| ||||||||||||| | ||||||||||||||||||||||||
Sbjct: 470 tcaaatctgaaatctaaattgacatcattaaaagatatcccaactccagtattcttcaca 411
Query: 424 aawatgtwagtgattgcwtcaagttcaatgtgatcaaaagtcatagttatcggcactgtg 483
|| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 aatatgttagtgattgcttcaagttcaatgtgatcaaaagtcatagttatcggcactgtg 351
Query: 484 aaagaatcawttgawatgagtatcggggtggtgaattctggtgagacagcwtcatagaga 543
||||||||| |||| |||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 350 aaagaatcatttgatatgagtttcggggtggtgaattctggtgagacagcttcatagaga 291
Query: 544 agtaacaaattggcctcaatctcagtcgttatttgtatcattgcatctttgcaagarawc 603
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 290 agtaacaaattggcctcaatctcagtcgttatttgtatcattgcatctttgcaagagatc 231
Query: 604 ttgcagataccttttagtagagattttgattgagcagaaacatccaaatccaaaatctca 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 ttgcagataccttttagtagagattttgattgagcagaaacatccaaatccaaaatctca 171
Query: 664 agttgtggaatggtacggaaatcaacttgacgaacagttaccccagattttaggatatcc 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 agttgtggaatggtacggaaatcaacttgacgaacagttaccccagattttaggatatcc 111
Query: 724 aattttttcggtttcttttgggagtcgcttccatcctggccactagtagattctggattc 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 aattttttcggtttcttttgggagtcgcttccatcctggccactagtagattctggattc 51
Query: 784 tcaaatctgctgggattcaaagct 807
||||||||||||||||||||||||
Sbjct: 50 tcaaatctgctgggattcaaagct 27
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4255
Number of Sequences: 1807
Number of extensions: 4255
Number of successful extensions: 93
Number of sequences better than 1.0e-20: 1
length of query: 845
length of database: 10,358,551
effective HSP length: 16
effective length of query: 829
effective length of database: 10,329,639
effective search space: 8563270731
effective search space used: 8563270731
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.9 bits)